RNA–Protein interactions for RNA: ENST00000492269.1

NPM1P28-201, Transcript of nucleophosmin 1 pseudogene 28, humanhuman

BASIC

Gene NPM1P28, Length 840 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P28-201ENST00000492269 AEBP2Q6ZN18 517 aaPredicted RBP37.07■■■■□ 3.52
NPM1P28-201ENST00000492269 CHIC1Q5VXU3 224 aa35.69■■■■□ 3.3
NPM1P28-201ENST00000492269 SENP3Q9H4L4 574 aaPredicted RBP31.43■■■□□ 2.62
NPM1P28-201ENST00000492269 PHF23Q9BUL5 403 aaPredicted RBP31.4■■■□□ 2.62
NPM1P28-201ENST00000492269 FOXD1Q16676 465 aa29.3■■■□□ 2.28
NPM1P28-201ENST00000492269 PLPPR3Q6T4P5 718 aa28.71■■■□□ 2.19
NPM1P28-201ENST00000492269 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
NPM1P28-201ENST00000492269 ADRA2BP18089 450 aa27.74■■■□□ 2.03
NPM1P28-201ENST00000492269 PIAS4Q8N2W9 510 aaPredicted RBP27.42■■□□□ 1.98
NPM1P28-201ENST00000492269 MSH5O43196 834 aa27.12■■□□□ 1.93
NPM1P28-201ENST00000492269 POTEDQ86YR6 584 aa25.6■■□□□ 1.69
NPM1P28-201ENST00000492269 MAPK8IP2Q13387 824 aaPredicted RBP25.34■■□□□ 1.65
NPM1P28-201ENST00000492269 SCAF1Q9H7N4 1312 aaKnown RBP25.29■■□□□ 1.64
NPM1P28-201ENST00000492269 PPP4R3CPQ6ZMV5 832 aa25.26■■□□□ 1.63
NPM1P28-201ENST00000492269 DMRT2Q9Y5R5 561 aa25.06■■□□□ 1.6
NPM1P28-201ENST00000492269 CNKSR2Q8WXI2 1034 aa24.65■■□□□ 1.54
NPM1P28-201ENST00000492269 HOXD11P31277 338 aaPredicted RBP24.38■■□□□ 1.49
NPM1P28-201ENST00000492269 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
NPM1P28-201ENST00000492269 RNF216Q9NWF9 866 aaPredicted RBP24.3■■□□□ 1.48
NPM1P28-201ENST00000492269 KCNA4P22459 653 aa24.15■■□□□ 1.46
NPM1P28-201ENST00000492269 NPM3O75607 178 aaKnown RBP24.13■■□□□ 1.45
NPM1P28-201ENST00000492269 DCAF8L1A6NGE4 600 aa23.84■■□□□ 1.41
NPM1P28-201ENST00000492269 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
NPM1P28-201ENST00000492269 RNF39Q9H2S5 420 aa23.26■■□□□ 1.31
NPM1P28-201ENST00000492269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
NPM1P28-201ENST00000492269 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
NPM1P28-201ENST00000492269 C1QBPQ07021 282 aaKnown RBP22.92■■□□□ 1.26
NPM1P28-201ENST00000492269 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
NPM1P28-201ENST00000492269 SLC4A1APQ9BWU0 796 aaKnown RBP22.84■■□□□ 1.25
NPM1P28-201ENST00000492269 U3KPZ7 1027 aaPredicted RBP22.78■■□□□ 1.24
NPM1P28-201ENST00000492269 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
NPM1P28-201ENST00000492269 SPINK5Q9NQ38 1064 aaPredicted RBP22.27■■□□□ 1.16
NPM1P28-201ENST00000492269 ZBTB22O15209 634 aa22.26■■□□□ 1.15
NPM1P28-201ENST00000492269 MYCNP04198 464 aaPredicted RBP22.25■■□□□ 1.15
NPM1P28-201ENST00000492269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
NPM1P28-201ENST00000492269 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
NPM1P28-201ENST00000492269 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.13
NPM1P28-201ENST00000492269 CAPN15O75808 1086 aa22.11■■□□□ 1.13
NPM1P28-201ENST00000492269 APLP2Q06481 763 aa22.06■■□□□ 1.12
NPM1P28-201ENST00000492269 DSG3P32926 999 aa21.97■■□□□ 1.11
NPM1P28-201ENST00000492269 TRHP20396 242 aaPredicted RBP21.9■■□□□ 1.1
NPM1P28-201ENST00000492269 ZNF219Q9P2Y4 722 aaPredicted RBP21.89■■□□□ 1.09
NPM1P28-201ENST00000492269 ATF5Q9Y2D1 282 aaPredicted RBP21.78■■□□□ 1.08
NPM1P28-201ENST00000492269 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
NPM1P28-201ENST00000492269 ABCB7O75027 752 aa21.67■■□□□ 1.06
NPM1P28-201ENST00000492269 ATXN8OSP0DMR3 200 aa21.61■■□□□ 1.05
NPM1P28-201ENST00000492269 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
NPM1P28-201ENST00000492269 POLA2Q14181 598 aa21.49■■□□□ 1.03
NPM1P28-201ENST00000492269 ZBTB12Q9Y330 459 aaPredicted RBP21.04■□□□□ 0.96
NPM1P28-201ENST00000492269 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
NPM1P28-201ENST00000492269 MKRN4PQ13434 485 aaPredicted RBP20.82■□□□□ 0.92
NPM1P28-201ENST00000492269 OSCARQ8IYS5 282 aa20.77■□□□□ 0.92
NPM1P28-201ENST00000492269 FBLN2P98095 1184 aa20.74■□□□□ 0.91
NPM1P28-201ENST00000492269 AKT1S1Q96B36 256 aa20.54■□□□□ 0.88
NPM1P28-201ENST00000492269 SPDYE2BA6NHP3 402 aa20.48■□□□□ 0.87
NPM1P28-201ENST00000492269 SPDYE6P0CI01 402 aa20.48■□□□□ 0.87
NPM1P28-201ENST00000492269 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
NPM1P28-201ENST00000492269 REM2Q8IYK8 340 aaPredicted RBP20.36■□□□□ 0.85
NPM1P28-201ENST00000492269 SSUH2Q9Y2M2 353 aa20.33■□□□□ 0.85
NPM1P28-201ENST00000492269 ZNF692Q9BU19 519 aaPredicted RBP20.31■□□□□ 0.84
NPM1P28-201ENST00000492269 CHRDL2Q6WN34 429 aa20.21■□□□□ 0.83
NPM1P28-201ENST00000492269 POTEHQ6S545 545 aa20.14■□□□□ 0.81
NPM1P28-201ENST00000492269 PITPNM1O00562 1244 aa20.13■□□□□ 0.81
NPM1P28-201ENST00000492269 PABPN1Q86U42 306 aaKnown RBP eCLIP20.04■□□□□ 0.8
NPM1P28-201ENST00000492269 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
NPM1P28-201ENST00000492269 SPDYE1Q8NFV5 336 aaPredicted RBP19.97■□□□□ 0.79
NPM1P28-201ENST00000492269 FXR2P51116 673 aaKnown RBP eCLIP19.89■□□□□ 0.77
NPM1P28-201ENST00000492269 PIP4P2Q8N4L2 257 aa19.89■□□□□ 0.77
NPM1P28-201ENST00000492269 CLEC11AQ9Y240 323 aa19.86■□□□□ 0.77
NPM1P28-201ENST00000492269 PROM2Q8N271 834 aa19.75■□□□□ 0.75
NPM1P28-201ENST00000492269 PRR29P0C7W0 189 aa19.64■□□□□ 0.73
NPM1P28-201ENST00000492269 PRKAR2AP13861 404 aaKnown RBP19.58■□□□□ 0.72
NPM1P28-201ENST00000492269 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
NPM1P28-201ENST00000492269 FKBP8Q14318 412 aa19.56■□□□□ 0.72
NPM1P28-201ENST00000492269 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
NPM1P28-201ENST00000492269 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
NPM1P28-201ENST00000492269 HAX1O00165 279 aa19.3■□□□□ 0.68
NPM1P28-201ENST00000492269 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
NPM1P28-201ENST00000492269 EVX2Q03828 476 aa19.24■□□□□ 0.67
NPM1P28-201ENST00000492269 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
NPM1P28-201ENST00000492269 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
NPM1P28-201ENST00000492269 SP7Q8TDD2 431 aaPredicted RBP19.13■□□□□ 0.65
NPM1P28-201ENST00000492269 MIER1Q8N108 512 aa19■□□□□ 0.63
NPM1P28-201ENST00000492269 CD44P16070 742 aaKnown RBP18.98■□□□□ 0.63
NPM1P28-201ENST00000492269 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
NPM1P28-201ENST00000492269 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
NPM1P28-201ENST00000492269 PLCD3Q8N3E9 789 aa18.88■□□□□ 0.61
NPM1P28-201ENST00000492269 PLEKHG5O94827 1062 aa18.85■□□□□ 0.61
NPM1P28-201ENST00000492269 ZRANB1Q9UGI0 708 aa18.79■□□□□ 0.6
NPM1P28-201ENST00000492269 GABBR2O75899 941 aa18.78■□□□□ 0.6
NPM1P28-201ENST00000492269 VASPP50552 380 aaPredicted RBP18.78■□□□□ 0.6
NPM1P28-201ENST00000492269 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
NPM1P28-201ENST00000492269 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
NPM1P28-201ENST00000492269 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
NPM1P28-201ENST00000492269 NUBP1P53384 320 aa18.67■□□□□ 0.58
NPM1P28-201ENST00000492269 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
NPM1P28-201ENST00000492269 CLCN6P51797 869 aa18.64■□□□□ 0.57
NPM1P28-201ENST00000492269 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
NPM1P28-201ENST00000492269 PHF12Q96QT6 1004 aa18.6■□□□□ 0.57
NPM1P28-201ENST00000492269 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms