Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.71■□□□□ 0.59
RTN4Q9NQC3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 NTF6B-201ENST00000591913 560 ntBASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 TCF4-232ENST00000566286 2119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4Q9NQC3 AC136759.1-202ENST00000530858 2194 ntBASIC18.71■□□□□ 0.59
RTN4Q9NQC3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RTN4Q9NQC3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 INTS4P1-201ENST00000438455 1935 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC016734.2-201ENST00000624325 1377 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 NUS1P1-201ENST00000446295 882 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 VENTXP7-201ENST00000475503 772 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC148477.5-201ENST00000625164 1645 ntBASIC18.7■□□□□ 0.58
RTN4Q9NQC3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4Q9NQC3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms