RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
TCF4-232ENST00000566286 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
TCF4-232ENST00000566286 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
TCF4-232ENST00000566286 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
TCF4-232ENST00000566286 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
TCF4-232ENST00000566286 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
TCF4-232ENST00000566286 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
TCF4-232ENST00000566286 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
TCF4-232ENST00000566286 KCNA4P22459 653 aa18.99■□□□□ 0.63
TCF4-232ENST00000566286 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
TCF4-232ENST00000566286 ZCCHC6Q5VYS8 1495 aaKnown RBP18.8■□□□□ 0.6
TCF4-232ENST00000566286 RTN4Q9NQC3 1192 aaKnown RBP18.71■□□□□ 0.59
TCF4-232ENST00000566286 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
TCF4-232ENST00000566286 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
TCF4-232ENST00000566286 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
TCF4-232ENST00000566286 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
TCF4-232ENST00000566286 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
TCF4-232ENST00000566286 SLC4A1APQ9BWU0 796 aaKnown RBP18.3■□□□□ 0.52
TCF4-232ENST00000566286 ADRA2BP18089 450 aa18.19■□□□□ 0.5
TCF4-232ENST00000566286 HRCP23327 699 aa18.18■□□□□ 0.5
TCF4-232ENST00000566286 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.5
TCF4-232ENST00000566286 ABCC9O60706 1549 aa18.04■□□□□ 0.48
TCF4-232ENST00000566286 NACADO15069 1562 aa17.9■□□□□ 0.46
TCF4-232ENST00000566286 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
TCF4-232ENST00000566286 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
TCF4-232ENST00000566286 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
TCF4-232ENST00000566286 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
TCF4-232ENST00000566286 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
TCF4-232ENST00000566286 PPARGC1BQ86YN6 1023 aaKnown RBP17.62■□□□□ 0.41
TCF4-232ENST00000566286 ZBTB22O15209 634 aa17.57■□□□□ 0.4
TCF4-232ENST00000566286 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
TCF4-232ENST00000566286 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
TCF4-232ENST00000566286 PRKCSHP14314 528 aaPredicted RBP17.48■□□□□ 0.39
TCF4-232ENST00000566286 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
TCF4-232ENST00000566286 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
TCF4-232ENST00000566286 RSF1Q96T23 1441 aaPredicted RBP17.42■□□□□ 0.38
TCF4-232ENST00000566286 ZEB1P37275 1124 aaPredicted RBP17.39■□□□□ 0.38
TCF4-232ENST00000566286 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
TCF4-232ENST00000566286 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
TCF4-232ENST00000566286 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
TCF4-232ENST00000566286 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
TCF4-232ENST00000566286 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
TCF4-232ENST00000566286 BICRAQ9NZM4 1560 aa17.2■□□□□ 0.34
TCF4-232ENST00000566286 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
TCF4-232ENST00000566286 WIZO95785 1651 aa17.15■□□□□ 0.34
TCF4-232ENST00000566286 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
TCF4-232ENST00000566286 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
TCF4-232ENST00000566286 SMARCA4P51532 1647 aa17.1■□□□□ 0.33
TCF4-232ENST00000566286 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.33
TCF4-232ENST00000566286 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
TCF4-232ENST00000566286 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
TCF4-232ENST00000566286 BCANQ96GW7 911 aa17.02■□□□□ 0.31
TCF4-232ENST00000566286 PLCB2Q00722 1185 aa16.97■□□□□ 0.31
TCF4-232ENST00000566286 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
TCF4-232ENST00000566286 FKBP8Q14318 412 aa16.94■□□□□ 0.3
TCF4-232ENST00000566286 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
TCF4-232ENST00000566286 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
TCF4-232ENST00000566286 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
TCF4-232ENST00000566286 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
TCF4-232ENST00000566286 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
TCF4-232ENST00000566286 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
TCF4-232ENST00000566286 TPRNQ4KMQ1 711 aa16.81■□□□□ 0.28
TCF4-232ENST00000566286 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
TCF4-232ENST00000566286 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
TCF4-232ENST00000566286 ARXQ96QS3 562 aa16.78■□□□□ 0.28
TCF4-232ENST00000566286 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
TCF4-232ENST00000566286 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
TCF4-232ENST00000566286 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.26
TCF4-232ENST00000566286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
TCF4-232ENST00000566286 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
TCF4-232ENST00000566286 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
TCF4-232ENST00000566286 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
TCF4-232ENST00000566286 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
TCF4-232ENST00000566286 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
TCF4-232ENST00000566286 CEP162Q5TB80 1403 aa16.58■□□□□ 0.25
TCF4-232ENST00000566286 NEUROD1Q13562 356 aa16.58■□□□□ 0.24
TCF4-232ENST00000566286 EEA1Q15075 1411 aa16.57■□□□□ 0.24
TCF4-232ENST00000566286 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
TCF4-232ENST00000566286 TNIKQ9UKE5 1360 aa16.56■□□□□ 0.24
TCF4-232ENST00000566286 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
TCF4-232ENST00000566286 FOXD1Q16676 465 aa16.53■□□□□ 0.24
TCF4-232ENST00000566286 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
TCF4-232ENST00000566286 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
TCF4-232ENST00000566286 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
TCF4-232ENST00000566286 SOGA1O94964 1423 aa16.45■□□□□ 0.22
TCF4-232ENST00000566286 MYT1Q01538 1121 aa16.42■□□□□ 0.22
TCF4-232ENST00000566286 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
TCF4-232ENST00000566286 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
TCF4-232ENST00000566286 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
TCF4-232ENST00000566286 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
TCF4-232ENST00000566286 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
TCF4-232ENST00000566286 SYNJ1O43426 1573 aa16.33■□□□□ 0.21
TCF4-232ENST00000566286 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
TCF4-232ENST00000566286 HOMEZQ8IX15 550 aa16.33■□□□□ 0.2
TCF4-232ENST00000566286 KIF21BO75037 1637 aa16.3■□□□□ 0.2
TCF4-232ENST00000566286 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
TCF4-232ENST00000566286 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
TCF4-232ENST00000566286 CFTRP13569 1480 aa16.25■□□□□ 0.19
TCF4-232ENST00000566286 KDM2AQ9Y2K7 1162 aa16.25■□□□□ 0.19
TCF4-232ENST00000566286 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms