Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 FGFR3P6-201ENST00000457012 610 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 AC139887.3-201ENST00000568585 713 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 LINC01711-201ENST00000598340 967 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 AC008608.2-201ENST00000606089 416 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 REXO1L6P-202ENST00000619970 1078 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 SCARNA2-201ENST00000458748 420 ntBASIC14.34□□□□□ -0.11
HMG20AQ9NP66 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 SART3-203ENST00000546611 1184 ntBASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MTDHP4-201ENST00000600287 670 ntBASIC14.34□□□□□ -0.11
HMG20AQ9NP66 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms