Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.31■□□□□ 0.36
BPIFA3Q9BQP9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BPIFA3Q9BQP9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 RNA5SP416-201ENST00000516838 111 ntBASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AL645728.2-202ENST00000641679 227 ntBASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BPIFA3Q9BQP9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 HSPA7-201ENST00000445535 1927 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AC104457.1-201ENST00000401024 814 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AL591424.1-201ENST00000442569 1213 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AC009078.2-202ENST00000463353 338 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 BANF1P1-201ENST00000553684 263 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 MTHFR-210ENST00000641407 2387 ntBASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.29■□□□□ 0.36
BPIFA3Q9BQP9 NORAD-201ENST00000565493 5339 ntBASIC17.28■□□□□ 0.36
BPIFA3Q9BQP9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms