Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEK1Q96PY6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
NEK1Q96PY6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 TOMM22P5-201ENST00000416399 439 ntBASIC18.54■□□□□ 0.56
NEK1Q96PY6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC015910.1-201ENST00000579400 975 ntBASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC004461.2-201ENST00000629517 803 ntBASIC18.54■□□□□ 0.56
NEK1Q96PY6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 AL596257.1-201ENST00000641463 2694 ntBASIC18.54■□□□□ 0.56
NEK1Q96PY6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEK1Q96PY6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.54■□□□□ 0.56
NEK1Q96PY6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEK1Q96PY6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.53■□□□□ 0.56
NEK1Q96PY6 AC091951.1-201ENST00000512854 2465 ntBASIC18.52■□□□□ 0.56
NEK1Q96PY6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NEK1Q96PY6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
NEK1Q96PY6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms