Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC087499.6-201ENST00000411576 835 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC114501.2-201ENST00000439631 535 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC044860.1-202ENST00000559481 777 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AL662799.1-202ENST00000614205 422 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC004840.1-201ENST00000636359 365 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 AL691432.1-201ENST00000596308 1422 ntBASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SH3KBP1Q96B97 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 AP001282.1-201ENST00000531301 1499 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 MEP1AP4-201ENST00000423244 1087 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SPDYE22P-201ENST00000582158 798 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 AC239800.4-201ENST00000603712 296 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 AC063926.2-201ENST00000623766 1308 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 AC007541.1-201ENST00000570282 1469 ntBASIC15.59■□□□□ 0.09
SH3KBP1Q96B97 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SH3KBP1Q96B97 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 DFFBP1-201ENST00000433250 979 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 AC093004.1-201ENST00000508850 424 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 DOC2GP-202ENST00000514950 1163 ntBASIC15.58■□□□□ 0.08
SH3KBP1Q96B97 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms