Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMARCC2Q8TAQ2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.35■□□□□ 0.53
SMARCC2Q8TAQ2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.35■□□□□ 0.53
SMARCC2Q8TAQ2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.35■□□□□ 0.53
SMARCC2Q8TAQ2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SERBP1P5-201ENST00000510079 1181 ntBASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 ZNF890P-202ENST00000530367 1156 ntBASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMARCC2Q8TAQ2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMARCC2Q8TAQ2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 AC135586.1-201ENST00000539323 574 ntBASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 AC004840.1-201ENST00000636359 365 ntBASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMARCC2Q8TAQ2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMARCC2Q8TAQ2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms