Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 AC126755.1-201ENST00000525846 6405 ntBASIC16.08■□□□□ 0.17
ATPAF2Q8N5M1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AC009407.1-201ENST00000568958 598 ntBASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AF228730.6-201ENST00000641497 218 ntBASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AC084121.3-201ENST00000641716 218 ntBASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AC073347.1-201ENST00000421633 2643 ntBASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.08■□□□□ 0.16
ATPAF2Q8N5M1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 PPT1-215ENST00000641471 2368 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AC114501.2-201ENST00000439631 535 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AC135586.1-201ENST00000539323 574 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 TIMM17BP1-201ENST00000545713 516 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AC008738.7-201ENST00000609744 511 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 AC004461.2-201ENST00000629517 803 ntBASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.07■□□□□ 0.16
ATPAF2Q8N5M1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms