Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 RN7SL340P-201ENST00000470792 296 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AC068867.1-201ENST00000559855 150 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 MIR2392-201ENST00000584881 84 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AC009517.1-201ENST00000454750 570 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AC092896.1-201ENST00000465850 380 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 DUX4L46-201ENST00000566845 751 ntBASIC15.37■□□□□ 0.05
CUL9Q8IWT3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.37■□□□□ 0.05
CUL9Q8IWT3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SNORA57-201ENST00000383870 149 ntBASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AC104581.1-202ENST00000635932 2618 ntBASIC15.36■□□□□ 0.05
CUL9Q8IWT3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 GUSBP10-201ENST00000417412 665 ntBASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 MST1L-204ENST00000545160 559 ntTSL 4 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 AC112220.4-201ENST00000604982 1263 ntBASIC15.36■□□□□ 0.05
CUL9Q8IWT3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CUL9Q8IWT3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 STK24P1-201ENST00000455035 1291 ntBASIC15.35■□□□□ 0.05
CUL9Q8IWT3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC15.35■□□□□ 0.05
CUL9Q8IWT3 IGHEP2-201ENST00000519308 1256 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms