Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 GGT4P-201ENST00000623672 1708 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
APLFQ8IW19 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 REXO1L1P-202ENST00000608646 1974 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.66■□□□□ 0.1
APLFQ8IW19 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.66■□□□□ 0.1
APLFQ8IW19 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 AC125807.1-201ENST00000483097 614 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 TERF1P3-201ENST00000505638 1227 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.66■□□□□ 0.1
APLFQ8IW19 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.66■□□□□ 0.1
APLFQ8IW19 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 AC087641.1-201ENST00000557561 1021 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.66■□□□□ 0.1
APLFQ8IW19 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 AF228730.6-201ENST00000641497 218 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 AC084121.3-201ENST00000641716 218 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 AC105233.6-201ENST00000642093 218 ntBASIC15.66■□□□□ 0.1
APLFQ8IW19 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.66■□□□□ 0.1
APLFQ8IW19 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
APLFQ8IW19 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.66■□□□□ 0.1
APLFQ8IW19 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APLFQ8IW19 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 AL645728.1-201ENST00000366221 2101 ntBASIC15.65■□□□□ 0.1
APLFQ8IW19 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 AC006449.6-201ENST00000612330 2296 ntBASIC15.65■□□□□ 0.1
APLFQ8IW19 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.65■□□□□ 0.1
APLFQ8IW19 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 HCG4-201ENST00000418983 998 ntBASIC15.65■□□□□ 0.1
APLFQ8IW19 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.65■□□□□ 0.1
APLFQ8IW19 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 FAM207CP-201ENST00000443486 507 ntBASIC15.65■□□□□ 0.1
APLFQ8IW19 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.65■□□□□ 0.1
APLFQ8IW19 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
APLFQ8IW19 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
APLFQ8IW19 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.65■□□□□ 0.1
APLFQ8IW19 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.65■□□□□ 0.1
APLFQ8IW19 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.65■□□□□ 0.1
APLFQ8IW19 AL353732.1-201ENST00000569618 1459 ntBASIC15.65■□□□□ 0.1
APLFQ8IW19 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APLFQ8IW19 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
APLFQ8IW19 AC010327.5-201ENST00000586923 3061 ntBASIC15.64■□□□□ 0.09
APLFQ8IW19 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APLFQ8IW19 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms