Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 HMGN1P19-201ENST00000436976 333 ntBASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 AC140658.5-201ENST00000438532 169 ntBASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 MIR4515-201ENST00000584082 81 ntBASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 AC004835.2-201ENST00000603762 682 ntBASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDZRN4Q6ZMN7 AC006504.5-208ENST00000588784 2401 ntBASIC18.14■□□□□ 0.5
PDZRN4Q6ZMN7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDZRN4Q6ZMN7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDZRN4Q6ZMN7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AL122018.1-201ENST00000446607 2310 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 ADH5P3-201ENST00000433842 1137 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AC005412.3-201ENST00000580309 715 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AL139011.1-202ENST00000642063 584 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 REXO1L2P-201ENST00000425429 2069 ntBASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.14■□□□□ 0.49
PDZRN4Q6ZMN7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.13■□□□□ 0.49
PDZRN4Q6ZMN7 AC004461.1-201ENST00000412461 403 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms