Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 GGT3P-204ENST00000453783 1664 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 AC004832.2-201ENST00000426397 482 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 DNAJB3-201ENST00000446806 729 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 KRT18P34-201ENST00000488218 1270 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 PGAM5P1-201ENST00000518923 814 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.5□□□□□ -0.09
TMEM53Q6P2H8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 MCCD1P2-201ENST00000423228 335 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AC092474.2-201ENST00000424288 719 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AP002472.1-201ENST00000577490 586 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AL671883.3-201ENST00000603274 991 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 REXO1L1P-202ENST00000608646 1974 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 AP005117.1-202ENST00000581724 1908 ntBASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TMEM53Q6P2H8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PCGF3-213ENST00000620529 1899 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 FAM58CP-201ENST00000435741 640 ntBASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.48□□□□□ -0.09
TMEM53Q6P2H8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms