Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AC127383.1-201ENST00000444697 1800 ntBASIC14.93□□□□□ -0.02
CHRNB3Q05901 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AC139749.1-202ENST00000617529 3139 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 BX842568.4-201ENST00000421222 227 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 GPX1P2-201ENST00000429271 606 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 KRT18P3-201ENST00000451602 1288 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AC034105.1-201ENST00000563488 319 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 OR7E47P-204ENST00000575924 449 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 AC140113.2-201ENST00000604370 208 ntBASIC14.92□□□□□ -0.02
CHRNB3Q05901 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNB3Q05901 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNB3Q05901 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHRNB3Q05901 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.91□□□□□ -0.02
CHRNB3Q05901 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.91□□□□□ -0.02
CHRNB3Q05901 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms