Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
RPS3AP61247 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 PMS2P2-201ENST00000425039 1128 ntBASIC14.81□□□□□ -0.04
RPS3AP61247 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.81□□□□□ -0.04
RPS3AP61247 AC027612.4-201ENST00000605371 583 ntBASIC14.81□□□□□ -0.04
RPS3AP61247 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RPS3AP61247 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RPS3AP61247 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.81□□□□□ -0.04
RPS3AP61247 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 AL031731.1-201ENST00000642131 2094 ntBASIC14.81□□□□□ -0.04
RPS3AP61247 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RPS3AP61247 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.81□□□□□ -0.04
RPS3AP61247 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RPS3AP61247 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
RPS3AP61247 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 LINC01225-203ENST00000563550 1244 ntBASIC14.8□□□□□ -0.04
RPS3AP61247 AP000842.3-202ENST00000569238 1080 ntBASIC14.8□□□□□ -0.04
RPS3AP61247 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 LINC00628-201ENST00000628516 1289 ntBASIC14.8□□□□□ -0.04
RPS3AP61247 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.8□□□□□ -0.04
RPS3AP61247 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPS3AP61247 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.8□□□□□ -0.04
RPS3AP61247 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPS3AP61247 CR383656.2-201ENST00000548656 2254 ntBASIC14.8□□□□□ -0.04
RPS3AP61247 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RPS3AP61247 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RPS3AP61247 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPS3AP61247 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.79□□□□□ -0.04
RPS3AP61247 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPS3AP61247 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.79□□□□□ -0.04
RPS3AP61247 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms