Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
AP3S2P59780 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S2P59780 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S2P59780 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.52□□□□□ -0.24
AP3S2P59780 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
AP3S2P59780 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S2P59780 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
AP3S2P59780 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
AP3S2P59780 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
AP3S2P59780 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.52□□□□□ -0.24
AP3S2P59780 LINC01230-201ENST00000625222 3017 ntBASIC13.52□□□□□ -0.24
AP3S2P59780 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
AP3S2P59780 PMS2P4-201ENST00000412466 1052 ntBASIC13.52□□□□□ -0.25
AP3S2P59780 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 DRAXINP1-201ENST00000437611 948 ntBASIC13.52□□□□□ -0.25
AP3S2P59780 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.52□□□□□ -0.25
AP3S2P59780 AC004706.3-202ENST00000621574 984 ntBASIC13.52□□□□□ -0.25
AP3S2P59780 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AP3S2P59780 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.52□□□□□ -0.25
AP3S2P59780 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AP3S2P59780 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 AC027601.5-201ENST00000624065 2482 ntBASIC13.52□□□□□ -0.25
AP3S2P59780 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AP3S2P59780 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.52□□□□□ -0.25
AP3S2P59780 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AP3S2P59780 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S2P59780 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 AL359183.1-201ENST00000623796 2132 ntBASIC13.51□□□□□ -0.25
AP3S2P59780 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S2P59780 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S2P59780 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S2P59780 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.51□□□□□ -0.25
AP3S2P59780 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 IGHV3-47-201ENST00000425060 335 ntBASIC13.51□□□□□ -0.25
AP3S2P59780 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.51□□□□□ -0.25
AP3S2P59780 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.51□□□□□ -0.25
AP3S2P59780 AL136038.3-201ENST00000561909 1096 ntBASIC13.51□□□□□ -0.25
AP3S2P59780 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.51□□□□□ -0.25
AP3S2P59780 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 AC131212.3-201ENST00000624087 4219 ntBASIC13.51□□□□□ -0.25
AP3S2P59780 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.51□□□□□ -0.25
AP3S2P59780 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S2P59780 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S2P59780 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
AP3S2P59780 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S2P59780 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S2P59780 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms