Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL23P55773 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CCL23P55773 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCL23P55773 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL23P55773 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL23P55773 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL23P55773 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL23P55773 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCL23P55773 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL23P55773 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL23P55773 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 FAM8A4P-201ENST00000435433 1213 ntBASIC16.88■□□□□ 0.29
CCL23P55773 AL133466.1-201ENST00000447582 150 ntBASIC16.88■□□□□ 0.29
CCL23P55773 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL23P55773 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 RN7SL720P-201ENST00000488178 304 ntBASIC16.88■□□□□ 0.29
CCL23P55773 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL23P55773 MIR5572-201ENST00000583188 137 ntBASIC16.88■□□□□ 0.29
CCL23P55773 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 AP001505.2-201ENST00000616815 443 ntBASIC16.88■□□□□ 0.29
CCL23P55773 AC128714.1-201ENST00000637035 887 ntBASIC16.88■□□□□ 0.29
CCL23P55773 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL23P55773 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL23P55773 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL23P55773 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL23P55773 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.87■□□□□ 0.29
CCL23P55773 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL23P55773 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL23P55773 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SERPINA13P-202ENST00000478994 924 ntBASIC16.87■□□□□ 0.29
CCL23P55773 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.87■□□□□ 0.29
CCL23P55773 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL23P55773 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL23P55773 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL23P55773 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL23P55773 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL23P55773 PPY2P-201ENST00000582808 702 ntBASIC16.87■□□□□ 0.29
CCL23P55773 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CCL23P55773 AC025181.2-201ENST00000606994 802 ntBASIC16.87■□□□□ 0.29
CCL23P55773 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.87■□□□□ 0.29
CCL23P55773 AC011676.5-201ENST00000624864 2660 ntBASIC16.87■□□□□ 0.29
CCL23P55773 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.87■□□□□ 0.29
CCL23P55773 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL23P55773 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCL23P55773 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL23P55773 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.86■□□□□ 0.29
CCL23P55773 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCL23P55773 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms