Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRT6CP48668 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
KRT6CP48668 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.27■□□□□ 0.03
KRT6CP48668 AC009090.5-201ENST00000624886 2285 ntBASIC15.27■□□□□ 0.03
KRT6CP48668 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRT6CP48668 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6CP48668 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 AL627223.1-201ENST00000416693 442 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 AC136604.1-201ENST00000418535 575 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6CP48668 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6CP48668 YBX1P5-201ENST00000509441 847 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 AC105021.1-202ENST00000570572 669 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 MIR4469-201ENST00000583919 79 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 AL671883.3-201ENST00000603274 991 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 AC097359.3-201ENST00000603982 1210 ntBASIC15.26■□□□□ 0.03
KRT6CP48668 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
KRT6CP48668 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT6CP48668 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6CP48668 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6CP48668 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6CP48668 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 AC104581.4-201ENST00000623126 3052 ntBASIC15.25■□□□□ 0.03
KRT6CP48668 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KRT6CP48668 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KRT6CP48668 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 AZGP1P1-201ENST00000411909 902 ntBASIC15.25■□□□□ 0.03
KRT6CP48668 AC004461.1-201ENST00000412461 403 ntBASIC15.25■□□□□ 0.03
KRT6CP48668 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6CP48668 AP000344.2-201ENST00000512987 629 ntBASIC15.25■□□□□ 0.03
KRT6CP48668 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT6CP48668 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6CP48668 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT6CP48668 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT6CP48668 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms