Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.91□□□□□ -0.34
NKX2-1P43699 MIR1199-201ENST00000621445 119 ntBASIC12.91□□□□□ -0.34
NKX2-1P43699 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-1P43699 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
NKX2-1P43699 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-1P43699 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-1P43699 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
NKX2-1P43699 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
NKX2-1P43699 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.91□□□□□ -0.34
NKX2-1P43699 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 INTS4P1-203ENST00000641008 3683 ntBASIC12.91□□□□□ -0.34
NKX2-1P43699 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NKX2-1P43699 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 AC018892.3-201ENST00000623986 2499 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 PTENP1-202ENST00000532280 3996 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 AC117489.1-201ENST00000625169 3217 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 AC073621.1-201ENST00000392730 636 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.9□□□□□ -0.34
NKX2-1P43699 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.9□□□□□ -0.34
NKX2-1P43699 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.9□□□□□ -0.34
NKX2-1P43699 AC243562.2-201ENST00000561247 970 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 AC021087.4-201ENST00000563761 564 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 AC002347.1-201ENST00000569543 541 ntBASIC12.9□□□□□ -0.34
NKX2-1P43699 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
NKX2-1P43699 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.9□□□□□ -0.34
NKX2-1P43699 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NKX2-1P43699 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.9□□□□□ -0.35
NKX2-1P43699 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
NKX2-1P43699 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
NKX2-1P43699 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.9□□□□□ -0.35
NKX2-1P43699 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-1P43699 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-1P43699 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
NKX2-1P43699 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NKX2-1P43699 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 PMS2P7-201ENST00000506558 1336 ntBASIC12.89□□□□□ -0.35
NKX2-1P43699 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 AC140479.7-201ENST00000636301 2332 ntBASIC12.89□□□□□ -0.35
NKX2-1P43699 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-1P43699 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-1P43699 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.89□□□□□ -0.35
NKX2-1P43699 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NKX2-1P43699 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.89□□□□□ -0.35
NKX2-1P43699 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.89□□□□□ -0.35
NKX2-1P43699 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
NKX2-1P43699 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.89□□□□□ -0.35
NKX2-1P43699 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.89□□□□□ -0.35
NKX2-1P43699 AC091304.2-201ENST00000564639 760 ntBASIC12.89□□□□□ -0.35
NKX2-1P43699 MIR4313-201ENST00000580760 101 ntBASIC12.89□□□□□ -0.35
NKX2-1P43699 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NKX2-1P43699 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms