Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.7■□□□□ 0.42
PRPHP41219 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PRPHP41219 AC005498.2-205ENST00000593218 784 ntBASIC17.7■□□□□ 0.42
PRPHP41219 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
PRPHP41219 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.7■□□□□ 0.42
PRPHP41219 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PRPHP41219 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.7■□□□□ 0.42
PRPHP41219 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.7■□□□□ 0.42
PRPHP41219 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.7■□□□□ 0.42
PRPHP41219 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.7■□□□□ 0.42
PRPHP41219 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.7■□□□□ 0.42
PRPHP41219 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRPHP41219 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.69■□□□□ 0.42
PRPHP41219 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 BASP1P1-201ENST00000430708 665 ntBASIC17.69■□□□□ 0.42
PRPHP41219 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.69■□□□□ 0.42
PRPHP41219 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 CYMP-203ENST00000474680 1263 ntBASIC17.69■□□□□ 0.42
PRPHP41219 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRPHP41219 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.69■□□□□ 0.42
PRPHP41219 AC008738.7-201ENST00000609744 511 ntBASIC17.69■□□□□ 0.42
PRPHP41219 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PRPHP41219 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.69■□□□□ 0.42
PRPHP41219 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.69■□□□□ 0.42
PRPHP41219 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PRPHP41219 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRPHP41219 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 AC023157.3-201ENST00000619086 2088 ntBASIC17.68■□□□□ 0.42
PRPHP41219 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.68■□□□□ 0.42
PRPHP41219 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRPHP41219 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.68■□□□□ 0.42
PRPHP41219 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
PRPHP41219 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.68■□□□□ 0.42
PRPHP41219 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.68■□□□□ 0.42
PRPHP41219 AC138035.3-201ENST00000622706 2791 ntBASIC17.68■□□□□ 0.42
PRPHP41219 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PRPHP41219 AC004840.1-201ENST00000636359 365 ntBASIC17.68■□□□□ 0.42
PRPHP41219 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.68■□□□□ 0.42
PRPHP41219 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
PRPHP41219 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRPHP41219 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms