Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.02■□□□□ -0
LAMA1P25391 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.02■□□□□ -0
LAMA1P25391 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.02■□□□□ -0
LAMA1P25391 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.02■□□□□ -0
LAMA1P25391 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LAMA1P25391 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LAMA1P25391 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LAMA1P25391 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LAMA1P25391 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.02■□□□□ -0
LAMA1P25391 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.02■□□□□ -0
LAMA1P25391 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LAMA1P25391 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.02■□□□□ -0
LAMA1P25391 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 AC136759.1-202ENST00000530858 2194 ntBASIC15.02□□□□□ -0.01
LAMA1P25391 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LAMA1P25391 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LAMA1P25391 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 AP002414.2-201ENST00000591780 3365 ntBASIC15.02□□□□□ -0.01
LAMA1P25391 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.02□□□□□ -0.01
LAMA1P25391 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.02□□□□□ -0.01
LAMA1P25391 MIR4750-201ENST00000584564 56 ntBASIC15.02□□□□□ -0.01
LAMA1P25391 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.02□□□□□ -0.01
LAMA1P25391 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
LAMA1P25391 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LAMA1P25391 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.01□□□□□ -0.01
LAMA1P25391 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 AC025181.2-201ENST00000606994 802 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 AC026316.1-201ENST00000398900 414 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 AL139094.1-201ENST00000405549 1188 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 PDIA3P2-201ENST00000428073 158 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.01□□□□□ -0.01
LAMA1P25391 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.01□□□□□ -0.01
LAMA1P25391 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.01□□□□□ -0.01
LAMA1P25391 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.01□□□□□ -0.01
LAMA1P25391 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 HLA-C-210ENST00000640219 976 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LAMA1P25391 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 KRT8P14-201ENST00000414254 1442 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LAMA1P25391 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 AC114501.1-201ENST00000445949 172 ntBASIC15.01□□□□□ -0.01
LAMA1P25391 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LAMA1P25391 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LAMA1P25391 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LAMA1P25391 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15□□□□□ -0.01
LAMA1P25391 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LAMA1P25391 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LAMA1P25391 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LAMA1P25391 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15□□□□□ -0.01
LAMA1P25391 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15□□□□□ -0.01
LAMA1P25391 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LAMA1P25391 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15□□□□□ -0.01
LAMA1P25391 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15□□□□□ -0.01
LAMA1P25391 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms