Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
KRT6AP02538 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRT6AP02538 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.26■□□□□ 0.03
KRT6AP02538 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.26■□□□□ 0.03
KRT6AP02538 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KRT6AP02538 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KRT6AP02538 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 AZGP1P1-201ENST00000411909 902 ntBASIC15.25■□□□□ 0.03
KRT6AP02538 AC004461.1-201ENST00000412461 403 ntBASIC15.25■□□□□ 0.03
KRT6AP02538 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 AP000344.2-201ENST00000512987 629 ntBASIC15.25■□□□□ 0.03
KRT6AP02538 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT6AP02538 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.25■□□□□ 0.03
KRT6AP02538 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
KRT6AP02538 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.25■□□□□ 0.03
KRT6AP02538 AC003101.2-201ENST00000612557 442 ntBASIC15.25■□□□□ 0.03
KRT6AP02538 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
KRT6AP02538 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KRT6AP02538 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KRT6AP02538 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KRT6AP02538 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT6AP02538 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT6AP02538 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 FO393414.2-201ENST00000405153 598 ntBASIC15.24■□□□□ 0.03
KRT6AP02538 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT6AP02538 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
KRT6AP02538 FAM58DP-201ENST00000428076 619 ntBASIC15.24■□□□□ 0.03
KRT6AP02538 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT6AP02538 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.24■□□□□ 0.03
KRT6AP02538 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
KRT6AP02538 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT6AP02538 AC004835.2-201ENST00000603762 682 ntBASIC15.24■□□□□ 0.03
KRT6AP02538 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT6AP02538 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT6AP02538 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
KRT6AP02538 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT6AP02538 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms