Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC023090.2-201ENST00000625182 2110 ntBASIC13.99□□□□□ -0.17
PFDN1O60925 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PFDN1O60925 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN1O60925 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PFDN1O60925 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AL512652.2-201ENST00000625156 1716 ntBASIC13.98□□□□□ -0.17
PFDN1O60925 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PFDN1O60925 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN1O60925 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN1O60925 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.98□□□□□ -0.17
PFDN1O60925 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.98□□□□□ -0.17
PFDN1O60925 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN1O60925 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
PFDN1O60925 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.98□□□□□ -0.17
PFDN1O60925 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PFDN1O60925 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PFDN1O60925 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.97□□□□□ -0.17
PFDN1O60925 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PFDN1O60925 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
PFDN1O60925 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.97□□□□□ -0.17
PFDN1O60925 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.97□□□□□ -0.17
PFDN1O60925 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 AR-208ENST00000612452 10676 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
PFDN1O60925 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.97□□□□□ -0.17
PFDN1O60925 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PFDN1O60925 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PFDN1O60925 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.96□□□□□ -0.17
PFDN1O60925 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms