Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.74□□□□□ -0.05
HCN1O60741 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.74□□□□□ -0.05
HCN1O60741 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.74□□□□□ -0.05
HCN1O60741 AC105021.1-202ENST00000570572 669 ntBASIC14.74□□□□□ -0.05
HCN1O60741 RN7SL828P-201ENST00000607615 303 ntBASIC14.74□□□□□ -0.05
HCN1O60741 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 SPDYE12P-201ENST00000618416 771 ntBASIC14.74□□□□□ -0.05
HCN1O60741 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
HCN1O60741 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HCN1O60741 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HCN1O60741 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.74□□□□□ -0.05
HCN1O60741 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
HCN1O60741 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HCN1O60741 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.73□□□□□ -0.05
HCN1O60741 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.73□□□□□ -0.05
HCN1O60741 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 AC097376.2-205ENST00000610159 5334 ntBASIC14.73□□□□□ -0.05
HCN1O60741 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HCN1O60741 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
HCN1O60741 AC245100.5-201ENST00000452108 331 ntBASIC14.73□□□□□ -0.05
HCN1O60741 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.73□□□□□ -0.05
HCN1O60741 AC138761.1-201ENST00000584393 385 ntBASIC14.73□□□□□ -0.05
HCN1O60741 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.73□□□□□ -0.05
HCN1O60741 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.73□□□□□ -0.05
HCN1O60741 AC026979.3-201ENST00000607315 403 ntBASIC14.73□□□□□ -0.05
HCN1O60741 AL138828.2-201ENST00000615812 383 ntBASIC14.73□□□□□ -0.05
HCN1O60741 AL590560.3-201ENST00000623350 461 ntBASIC14.73□□□□□ -0.05
HCN1O60741 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.73□□□□□ -0.05
HCN1O60741 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HCN1O60741 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HCN1O60741 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HCN1O60741 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.72□□□□□ -0.05
HCN1O60741 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.72□□□□□ -0.05
HCN1O60741 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HCN1O60741 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.72□□□□□ -0.05
HCN1O60741 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms