Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLDN5O00501 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLDN5O00501 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLDN5O00501 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 INTS4P2-202ENST00000614726 2019 ntBASIC16.48■□□□□ 0.23
CLDN5O00501 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN5O00501 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 AL512384.1-201ENST00000406683 331 ntBASIC16.48■□□□□ 0.23
CLDN5O00501 AC134915.1-201ENST00000426461 574 ntBASIC16.48■□□□□ 0.23
CLDN5O00501 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN5O00501 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN5O00501 KRT17P7-201ENST00000451704 1104 ntBASIC16.48■□□□□ 0.23
CLDN5O00501 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.48■□□□□ 0.23
CLDN5O00501 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 CR383656.12-201ENST00000549567 513 ntBASIC16.48■□□□□ 0.23
CLDN5O00501 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.48■□□□□ 0.23
CLDN5O00501 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.48■□□□□ 0.23
CLDN5O00501 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN5O00501 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLDN5O00501 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLDN5O00501 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLDN5O00501 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN5O00501 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN5O00501 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 AC090616.6-203ENST00000579186 1945 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 DRD5P1-201ENST00000456605 1438 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN5O00501 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN5O00501 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC011495.1-201ENST00000498085 584 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN5O00501 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC120045.2-201ENST00000567334 178 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC124283.3-201ENST00000570869 594 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 RPSAP52-203ENST00000622976 1023 ntBASIC16.47■□□□□ 0.23
CLDN5O00501 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.47■□□□□ 0.23
CLDN5O00501 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN5O00501 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CLDN5O00501 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLDN5O00501 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms