Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 CYP4F24P-201ENST00000586049 1580 ntBASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AC007967.4-201ENST00000614700 386 ntBASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
HLA-DRB4X5D2U9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
HLA-DRB4X5D2U9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.9□□□□□ -0.51
HLA-DRB4X5D2U9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.9□□□□□ -0.51
HLA-DRB4X5D2U9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.9□□□□□ -0.51
HLA-DRB4X5D2U9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 BNIP3P1-202ENST00000550043 1585 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AC097376.2-205ENST00000610159 5334 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AC027612.4-201ENST00000605371 583 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AC003101.2-201ENST00000612557 442 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 MIR6080-201ENST00000617359 66 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AL691403.2-201ENST00000618460 490 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AL035456.1-201ENST00000456064 1369 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 AL136982.4-201ENST00000437689 1740 ntBASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DRB4X5D2U9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 PCDHA3-202ENST00000532566 4594 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms