Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.9■□□□□ 0.62
EYA3Q99504 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.9■□□□□ 0.62
EYA3Q99504 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
EYA3Q99504 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.9■□□□□ 0.62
EYA3Q99504 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EYA3Q99504 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.9■□□□□ 0.62
EYA3Q99504 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
EYA3Q99504 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
EYA3Q99504 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
EYA3Q99504 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
EYA3Q99504 AC092506.1-202ENST00000401022 528 ntBASIC18.89■□□□□ 0.61
EYA3Q99504 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 IGHJ2P-201ENST00000454480 60 ntBASIC18.89■□□□□ 0.61
EYA3Q99504 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.89■□□□□ 0.61
EYA3Q99504 AC091804.1-201ENST00000486888 567 ntBASIC18.89■□□□□ 0.61
EYA3Q99504 SCARNA20.5-201ENST00000516991 142 ntBASIC18.89■□□□□ 0.61
EYA3Q99504 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.89■□□□□ 0.61
EYA3Q99504 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.89■□□□□ 0.61
EYA3Q99504 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
EYA3Q99504 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 AC138028.6-201ENST00000616106 1482 ntBASIC18.89■□□□□ 0.61
EYA3Q99504 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.89■□□□□ 0.61
EYA3Q99504 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
EYA3Q99504 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.88■□□□□ 0.61
EYA3Q99504 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
EYA3Q99504 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.88■□□□□ 0.61
EYA3Q99504 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.88■□□□□ 0.61
EYA3Q99504 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.88■□□□□ 0.61
EYA3Q99504 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.88■□□□□ 0.61
EYA3Q99504 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.88■□□□□ 0.61
EYA3Q99504 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.88■□□□□ 0.61
EYA3Q99504 RHOQP1-201ENST00000555758 579 ntBASIC18.88■□□□□ 0.61
EYA3Q99504 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.88■□□□□ 0.61
EYA3Q99504 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.88■□□□□ 0.61
EYA3Q99504 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.88■□□□□ 0.61
EYA3Q99504 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.88■□□□□ 0.61
EYA3Q99504 AC025181.2-201ENST00000606994 802 ntBASIC18.88■□□□□ 0.61
EYA3Q99504 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
EYA3Q99504 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
EYA3Q99504 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
EYA3Q99504 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
EYA3Q99504 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EYA3Q99504 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
EYA3Q99504 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
EYA3Q99504 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.87■□□□□ 0.61
EYA3Q99504 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.87■□□□□ 0.61
EYA3Q99504 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.87■□□□□ 0.61
EYA3Q99504 CNN2P10-201ENST00000443067 918 ntBASIC18.87■□□□□ 0.61
EYA3Q99504 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.87■□□□□ 0.61
EYA3Q99504 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.87■□□□□ 0.61
EYA3Q99504 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
EYA3Q99504 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
EYA3Q99504 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
EYA3Q99504 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.87■□□□□ 0.61
EYA3Q99504 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms