Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 STARP1-201ENST00000397973 869 ntBASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 SPDYE15P-201ENST00000424157 909 ntBASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 RN7SL606P-201ENST00000472779 293 ntBASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 Z99916.2-201ENST00000604037 246 ntBASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CHCHD1Q96BP2 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 AC015909.5-201ENST00000624336 2266 ntBASIC11.46□□□□□ -0.58
CHCHD1Q96BP2 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 NCF1C-201ENST00000438382 1427 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AC092597.1-201ENST00000487352 616 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AC010331.1-201ENST00000611423 582 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 AL031432.5-201ENST00000641059 760 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CHCHD1Q96BP2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms