Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 SSR4P1-203ENST00000599569 2260 ntBASIC18.4■□□□□ 0.54
STAG1Q8WVM7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 DRD5P1-201ENST00000456605 1438 ntBASIC18.4■□□□□ 0.54
STAG1Q8WVM7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
STAG1Q8WVM7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 AC087481.3-201ENST00000602886 1894 ntBASIC18.39■□□□□ 0.54
STAG1Q8WVM7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
STAG1Q8WVM7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC136621.1-201ENST00000624017 2304 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 RPL5P21-201ENST00000404620 815 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 VDAC1P7-201ENST00000462417 847 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 RPL13AP25-201ENST00000484130 612 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC011495.1-201ENST00000498085 584 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC026410.3-201ENST00000514280 936 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 IGHV3-72-202ENST00000621503 303 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 INTS4P2-202ENST00000614726 2019 ntBASIC18.39■□□□□ 0.53
STAG1Q8WVM7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
STAG1Q8WVM7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
STAG1Q8WVM7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
STAG1Q8WVM7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
STAG1Q8WVM7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
STAG1Q8WVM7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
STAG1Q8WVM7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms