Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC107Q8WV48 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 HLA-A-201ENST00000376802 1334 ntBASIC13.67□□□□□ -0.22
CCDC107Q8WV48 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AC018845.2-201ENST00000568326 409 ntBASIC13.67□□□□□ -0.22
CCDC107Q8WV48 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AC023141.13-201ENST00000604991 943 ntBASIC13.67□□□□□ -0.22
CCDC107Q8WV48 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCDC107Q8WV48 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 BCAR1-209ENST00000546196 1340 ntBASIC13.66□□□□□ -0.22
CCDC107Q8WV48 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 AC104109.2-201ENST00000602919 1418 ntBASIC13.66□□□□□ -0.22
CCDC107Q8WV48 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 AC007967.2-201ENST00000432613 625 ntBASIC13.66□□□□□ -0.22
CCDC107Q8WV48 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CCDC107Q8WV48 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms