Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.62■□□□□ 0.25
UBA3Q8TBC4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 SSR4P1-203ENST00000599569 2260 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 SPTLC1P1-201ENST00000447199 261 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 AC023310.3-201ENST00000557027 670 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 AC100756.1-201ENST00000562736 682 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 AC138749.3-201ENST00000567691 622 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 AC116165.1-201ENST00000611806 668 ntBASIC16.61■□□□□ 0.25
UBA3Q8TBC4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBA3Q8TBC4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 TOMM22P5-201ENST00000416399 439 ntBASIC16.6■□□□□ 0.25
UBA3Q8TBC4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 AC009118.2-201ENST00000613275 655 ntBASIC16.6■□□□□ 0.25
UBA3Q8TBC4 AC008761.3-201ENST00000624803 892 ntBASIC16.6■□□□□ 0.25
UBA3Q8TBC4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 AC087481.3-201ENST00000602886 1894 ntBASIC16.6■□□□□ 0.25
UBA3Q8TBC4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBA3Q8TBC4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms