Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 PFN2-202ENST00000423691 911 ntTSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 NOC2LP1-201ENST00000450578 752 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC022616.1-201ENST00000518688 554 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC009779.1-201ENST00000551138 283 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC012044.1-201ENST00000603431 297 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC073352.2-201ENST00000609385 439 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 RN7SKP214-201ENST00000364208 315 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 AC114501.1-201ENST00000445949 172 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 RTN3P1-201ENST00000536295 711 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AL353770.1-201ENST00000614915 403 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 AL162426.1-201ENST00000624141 743 ntBASIC18.67■□□□□ 0.58
SLX4Q8IY92 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLX4Q8IY92 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLX4Q8IY92 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 AC098935.1-201ENST00000446057 611 ntBASIC18.66■□□□□ 0.58
SLX4Q8IY92 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLX4Q8IY92 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.66■□□□□ 0.58
SLX4Q8IY92 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLX4Q8IY92 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SLX4Q8IY92 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms