Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC71Q8IV32 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC71Q8IV32 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC71Q8IV32 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CCDC71Q8IV32 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC71Q8IV32 C18orf15-201ENST00000623680 2534 ntBASIC14.79□□□□□ -0.04
CCDC71Q8IV32 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 LINC01101-201ENST00000622953 1884 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AC007292.2-201ENST00000593524 1812 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AL158211.3-201ENST00000607385 239 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AL035252.4-201ENST00000624174 288 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AL359258.3-201ENST00000622910 2331 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 AC007191.1-201ENST00000623179 2995 ntBASIC14.78□□□□□ -0.04
CCDC71Q8IV32 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC71Q8IV32 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC71Q8IV32 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 MIR3909-201ENST00000579518 119 ntBASIC14.77□□□□□ -0.05
CCDC71Q8IV32 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AC008761.3-201ENST00000624803 892 ntBASIC14.77□□□□□ -0.05
CCDC71Q8IV32 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
CCDC71Q8IV32 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC71Q8IV32 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC71Q8IV32 AC011477.6-201ENST00000604980 1927 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms