Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.95□□□□□ -0.02
CHRNB3Q05901 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.95□□□□□ -0.02
CHRNB3Q05901 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHRNB3Q05901 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 AC006538.3-201ENST00000612495 578 ntBASIC14.95□□□□□ -0.02
CHRNB3Q05901 FGD5P1-202ENST00000614866 2498 ntBASIC14.95□□□□□ -0.02
CHRNB3Q05901 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 AL589702.1-201ENST00000641229 1509 ntBASIC14.95□□□□□ -0.02
CHRNB3Q05901 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB3Q05901 AP002414.3-201ENST00000589352 1468 ntBASIC14.95□□□□□ -0.02
CHRNB3Q05901 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.95□□□□□ -0.02
CHRNB3Q05901 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AC148477.4-201ENST00000613430 1793 ntBASIC14.94□□□□□ -0.02
CHRNB3Q05901 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 RNA5SP416-201ENST00000516838 111 ntBASIC14.94□□□□□ -0.02
CHRNB3Q05901 UNC93B6-202ENST00000528242 690 ntBASIC14.94□□□□□ -0.02
CHRNB3Q05901 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB3Q05901 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB3Q05901 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 CXCL1P1-201ENST00000502804 216 ntBASIC14.93□□□□□ -0.02
CHRNB3Q05901 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB3Q05901 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms