Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX4P78413 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX4P78413 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
IRX4P78413 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.43■□□□□ 0.22
IRX4P78413 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
IRX4P78413 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.43■□□□□ 0.22
IRX4P78413 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 AC010336.2-201ENST00000564226 506 ntBASIC16.43■□□□□ 0.22
IRX4P78413 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
IRX4P78413 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.43■□□□□ 0.22
IRX4P78413 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 AP005117.1-202ENST00000581724 1908 ntBASIC16.43■□□□□ 0.22
IRX4P78413 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 CDC14C-201ENST00000428251 1719 ntBASIC16.42■□□□□ 0.22
IRX4P78413 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 LINC02447-202ENST00000501888 2146 ntBASIC16.42■□□□□ 0.22
IRX4P78413 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 AL136379.1-201ENST00000623471 2642 ntBASIC16.42■□□□□ 0.22
IRX4P78413 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.42■□□□□ 0.22
IRX4P78413 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.42■□□□□ 0.22
IRX4P78413 GIMAP3P-201ENST00000495150 836 ntBASIC16.42■□□□□ 0.22
IRX4P78413 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.42■□□□□ 0.22
IRX4P78413 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
IRX4P78413 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.42■□□□□ 0.22
IRX4P78413 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.42■□□□□ 0.22
IRX4P78413 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IRX4P78413 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
IRX4P78413 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IRX4P78413 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 AC098614.1-201ENST00000368528 745 ntBASIC16.41■□□□□ 0.22
IRX4P78413 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
IRX4P78413 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX4P78413 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.41■□□□□ 0.22
IRX4P78413 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IRX4P78413 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.41■□□□□ 0.22
IRX4P78413 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms