Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AC007292.2-201ENST00000593524 1812 ntBASIC13.7□□□□□ -0.22
ATP1B3P54709 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 FAM220BP-201ENST00000377689 816 ntBASIC13.7□□□□□ -0.22
ATP1B3P54709 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.7□□□□□ -0.22
ATP1B3P54709 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.7□□□□□ -0.22
ATP1B3P54709 AL121894.2-201ENST00000602977 491 ntBASIC13.7□□□□□ -0.22
ATP1B3P54709 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 AC026120.1-201ENST00000611536 926 ntBASIC13.7□□□□□ -0.22
ATP1B3P54709 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ATP1B3P54709 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
ATP1B3P54709 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.7□□□□□ -0.22
ATP1B3P54709 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATP1B3P54709 SBF1P1-201ENST00000444527 5631 ntBASIC13.7□□□□□ -0.22
ATP1B3P54709 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 FOXO1B-201ENST00000504678 1527 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 HLA-H-201ENST00000383620 1096 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AC142381.1-201ENST00000426099 345 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.69□□□□□ -0.22
ATP1B3P54709 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 KRT8P23-201ENST00000560090 1207 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ATP1B3P54709 AC092902.6-201ENST00000641783 218 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ATP1B3P54709 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 BNIP3P1-202ENST00000550043 1585 ntBASIC13.69□□□□□ -0.22
ATP1B3P54709 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.69□□□□□ -0.22
ATP1B3P54709 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ATP1B3P54709 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms