Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 DGKZP1-201ENST00000378718 2776 ntBASIC10.44□□□□□ -0.74
PCP4P48539 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
PCP4P48539 AC113367.3-201ENST00000508316 1912 ntBASIC10.44□□□□□ -0.74
PCP4P48539 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
PCP4P48539 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PCP4P48539 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
PCP4P48539 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
PCP4P48539 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.44□□□□□ -0.74
PCP4P48539 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 TCAM1P-207ENST00000485295 1537 ntBASIC10.43□□□□□ -0.74
PCP4P48539 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 AP001267.2-201ENST00000532619 2086 ntBASIC10.43□□□□□ -0.74
PCP4P48539 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
PCP4P48539 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.43□□□□□ -0.74
PCP4P48539 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 AL122035.2-201ENST00000609125 1870 ntBASIC10.43□□□□□ -0.74
PCP4P48539 TTYH2-201ENST00000269346 3490 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 GRAMD4P7-201ENST00000578182 1232 ntBASIC10.43□□□□□ -0.74
PCP4P48539 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
PCP4P48539 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
PCP4P48539 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
PCP4P48539 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 NFYC-AS1-201ENST00000606277 1687 ntBASIC10.43□□□□□ -0.74
PCP4P48539 AK2-215ENST00000629371 3576 ntTSL 3 BASIC10.43□□□□□ -0.74
PCP4P48539 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 AC009831.1-201ENST00000580420 1582 ntBASIC10.43□□□□□ -0.74
PCP4P48539 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 MTMR9LP-203ENST00000426597 1545 ntBASIC10.43□□□□□ -0.74
PCP4P48539 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
PCP4P48539 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC10.43□□□□□ -0.74
PCP4P48539 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
PCP4P48539 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 ICOS-201ENST00000316386 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 AC090114.2-201ENST00000608477 7054 ntBASIC10.42□□□□□ -0.74
PCP4P48539 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.42□□□□□ -0.74
PCP4P48539 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PCP4P48539 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 DPY19L2P3-201ENST00000414296 2326 ntBASIC10.42□□□□□ -0.74
PCP4P48539 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
PCP4P48539 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.42□□□□□ -0.74
PCP4P48539 GUCY2EP-203ENST00000531117 1918 ntBASIC10.42□□□□□ -0.74
PCP4P48539 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms