Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
MMP13P45452 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP13P45452 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 AC232323.1-201ENST00000540724 2099 ntBASIC16.36■□□□□ 0.21
MMP13P45452 REXO1L5P-201ENST00000622260 2098 ntBASIC16.36■□□□□ 0.21
MMP13P45452 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.36■□□□□ 0.21
MMP13P45452 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
MMP13P45452 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 BNIP3P1-202ENST00000550043 1585 ntBASIC16.36■□□□□ 0.21
MMP13P45452 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP13P45452 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 MTND6P24-201ENST00000440466 518 ntBASIC16.36■□□□□ 0.21
MMP13P45452 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP13P45452 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.36■□□□□ 0.21
MMP13P45452 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP13P45452 RN7SL828P-201ENST00000607615 303 ntBASIC16.36■□□□□ 0.21
MMP13P45452 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP13P45452 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.36■□□□□ 0.21
MMP13P45452 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
MMP13P45452 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP13P45452 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP13P45452 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MMP13P45452 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 C18orf15-201ENST00000623680 2534 ntBASIC16.35■□□□□ 0.21
MMP13P45452 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP13P45452 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.35■□□□□ 0.21
MMP13P45452 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.35■□□□□ 0.21
MMP13P45452 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP13P45452 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.35■□□□□ 0.21
MMP13P45452 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 TUBB3P1-201ENST00000405796 1332 ntBASIC16.35■□□□□ 0.21
MMP13P45452 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP13P45452 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP13P45452 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP13P45452 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP13P45452 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MMP13P45452 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms