Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 AC024909.3-201ENST00000611513 2257 ntBASIC13.48□□□□□ -0.25
TNFSF4P23510 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 HMGN1P19-201ENST00000436976 333 ntBASIC13.48□□□□□ -0.25
TNFSF4P23510 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.48□□□□□ -0.25
TNFSF4P23510 FAM207CP-201ENST00000443486 507 ntBASIC13.48□□□□□ -0.25
TNFSF4P23510 TSPY16P-201ENST00000449843 468 ntBASIC13.48□□□□□ -0.25
TNFSF4P23510 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.48□□□□□ -0.25
TNFSF4P23510 AC044860.1-202ENST00000559481 777 ntBASIC13.48□□□□□ -0.25
TNFSF4P23510 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.48□□□□□ -0.25
TNFSF4P23510 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.48□□□□□ -0.25
TNFSF4P23510 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.48□□□□□ -0.25
TNFSF4P23510 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TNFSF4P23510 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.48□□□□□ -0.25
TNFSF4P23510 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC026691.1-201ENST00000602502 2017 ntBASIC13.47□□□□□ -0.25
TNFSF4P23510 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.47□□□□□ -0.25
TNFSF4P23510 FAM8A3P-201ENST00000427218 844 ntBASIC13.47□□□□□ -0.25
TNFSF4P23510 HIST3H2BA-201ENST00000436555 524 ntBASIC13.47□□□□□ -0.25
TNFSF4P23510 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TNFSF4P23510 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.47□□□□□ -0.25
TNFSF4P23510 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.47□□□□□ -0.25
TNFSF4P23510 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC025048.3-201ENST00000590609 569 ntBASIC13.47□□□□□ -0.25
TNFSF4P23510 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TNFSF4P23510 AC005702.4-201ENST00000618393 416 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms