Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP8P22894 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP8P22894 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 AC004890.2-204ENST00000481968 304 ntBASIC16.48■□□□□ 0.23
MMP8P22894 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.48■□□□□ 0.23
MMP8P22894 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP8P22894 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP8P22894 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP8P22894 AC106028.4-201ENST00000614509 607 ntBASIC16.48■□□□□ 0.23
MMP8P22894 AL121723.1-201ENST00000445194 1519 ntBASIC16.48■□□□□ 0.23
MMP8P22894 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP8P22894 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP8P22894 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP8P22894 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
MMP8P22894 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
MMP8P22894 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 MST1L-201ENST00000442552 2185 ntBASIC16.47■□□□□ 0.23
MMP8P22894 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MMP8P22894 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MMP8P22894 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.47■□□□□ 0.23
MMP8P22894 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP8P22894 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 KRT18P43-201ENST00000469825 1281 ntBASIC16.47■□□□□ 0.23
MMP8P22894 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP8P22894 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.47■□□□□ 0.23
MMP8P22894 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP8P22894 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP8P22894 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP8P22894 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP8P22894 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 TNRC18P2-201ENST00000417666 2714 ntBASIC16.46■□□□□ 0.23
MMP8P22894 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
MMP8P22894 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP8P22894 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.46■□□□□ 0.23
MMP8P22894 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 RFPL4AP1-201ENST00000530883 850 ntBASIC16.46■□□□□ 0.23
MMP8P22894 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP8P22894 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.46■□□□□ 0.23
MMP8P22894 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP8P22894 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP8P22894 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms