Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 LINC01568-207ENST00000641790 1380 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.13□□□□□ -0.47
RAB4AP20338 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 MROH4P-201ENST00000431302 1578 ntBASIC12.13□□□□□ -0.47
RAB4AP20338 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.13□□□□□ -0.47
RAB4AP20338 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAB4AP20338 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 KRT18P22-201ENST00000402024 1347 ntBASIC12.12□□□□□ -0.47
RAB4AP20338 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 REXO1L8P-201ENST00000604378 1897 ntBASIC12.12□□□□□ -0.47
RAB4AP20338 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.12□□□□□ -0.47
RAB4AP20338 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 AL353801.3-201ENST00000609898 542 ntBASIC12.12□□□□□ -0.47
RAB4AP20338 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.12□□□□□ -0.47
RAB4AP20338 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.12□□□□□ -0.47
RAB4AP20338 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAB4AP20338 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.12□□□□□ -0.47
RAB4AP20338 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB4AP20338 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB4AP20338 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms