Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
KRT4P19013 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT4P19013 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT4P19013 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.81■□□□□ 0.12
KRT4P19013 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT4P19013 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT4P19013 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT4P19013 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.81■□□□□ 0.12
KRT4P19013 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
KRT4P19013 AL450472.2-201ENST00000603663 1156 ntBASIC15.81■□□□□ 0.12
KRT4P19013 SPTSSB-204ENST00000617024 1292 ntBASIC15.81■□□□□ 0.12
KRT4P19013 AC025580.3-201ENST00000617932 1424 ntBASIC15.81■□□□□ 0.12
KRT4P19013 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
KRT4P19013 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT4P19013 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT4P19013 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
KRT4P19013 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT4P19013 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
KRT4P19013 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT4P19013 AL138918.1-201ENST00000568306 659 ntBASIC15.8■□□□□ 0.12
KRT4P19013 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 AC073389.1-201ENST00000595595 795 ntBASIC15.8■□□□□ 0.12
KRT4P19013 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT4P19013 MIR7706-201ENST00000613747 67 ntBASIC15.8■□□□□ 0.12
KRT4P19013 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.8■□□□□ 0.12
KRT4P19013 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
KRT4P19013 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT4P19013 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT4P19013 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT4P19013 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT4P19013 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
KRT4P19013 GRK6P1-201ENST00000400595 1711 ntBASIC15.8■□□□□ 0.12
KRT4P19013 AL136982.4-201ENST00000437689 1740 ntBASIC15.8■□□□□ 0.12
KRT4P19013 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
KRT4P19013 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KRT4P19013 OR2I1P-209ENST00000641730 5365 ntBASIC15.79■□□□□ 0.12
KRT4P19013 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
KRT4P19013 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT4P19013 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT4P19013 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT4P19013 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT4P19013 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms