Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP2P08253 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 AC126365.1-201ENST00000578585 1514 ntBASIC15.74■□□□□ 0.11
MMP2P08253 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.74■□□□□ 0.11
MMP2P08253 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 AC236430.1-201ENST00000402231 743 ntBASIC15.74■□□□□ 0.11
MMP2P08253 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 AC002472.2-201ENST00000442739 958 ntBASIC15.74■□□□□ 0.11
MMP2P08253 FAM207CP-201ENST00000443486 507 ntBASIC15.74■□□□□ 0.11
MMP2P08253 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 LINC02560-201ENST00000596379 459 ntBASIC15.74■□□□□ 0.11
MMP2P08253 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 CICP11-201ENST00000434745 2827 ntBASIC15.74■□□□□ 0.11
MMP2P08253 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MMP2P08253 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
MMP2P08253 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.74■□□□□ 0.11
MMP2P08253 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 MST1L-201ENST00000442552 2185 ntBASIC15.73■□□□□ 0.11
MMP2P08253 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.73■□□□□ 0.11
MMP2P08253 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 AC008761.3-201ENST00000624803 892 ntBASIC15.73■□□□□ 0.11
MMP2P08253 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
MMP2P08253 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MMP2P08253 SLC7A15P-201ENST00000424028 1363 ntBASIC15.73■□□□□ 0.11
MMP2P08253 AC023024.2-201ENST00000623561 1993 ntBASIC15.73■□□□□ 0.11
MMP2P08253 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.73■□□□□ 0.11
MMP2P08253 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MMP2P08253 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.72■□□□□ 0.11
MMP2P08253 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MMP2P08253 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms