Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 FER1L4-210ENST00000615531 5998 ntBASIC15.9■□□□□ 0.14
HLA-DQB2P05538 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 TIMM17BP1-201ENST00000545713 516 ntBASIC15.9■□□□□ 0.14
HLA-DQB2P05538 AL109954.1-202ENST00000564051 2148 ntBASIC15.9■□□□□ 0.14
HLA-DQB2P05538 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 SRD5A3P1-201ENST00000603021 949 ntBASIC15.9■□□□□ 0.14
HLA-DQB2P05538 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-DQB2P05538 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
HLA-DQB2P05538 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 AL133267.1-201ENST00000398220 340 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 INGX-202ENST00000489074 768 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RNA5SP421-201ENST00000516864 134 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 AL158212.4-201ENST00000624062 1286 ntBASIC15.89■□□□□ 0.13
HLA-DQB2P05538 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-DQB2P05538 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms