Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 AZGP1P1-201ENST00000411909 902 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 AC074044.1-201ENST00000609673 707 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 AC068587.10-201ENST00000641210 219 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 HLA-A-202ENST00000376806 1854 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 AL442647.2-201ENST00000429864 857 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 KLF2P4-201ENST00000451959 1225 ntBASIC13.22□□□□□ -0.29
ABCA1O95477 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.22□□□□□ -0.29
ABCA1O95477 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.22□□□□□ -0.29
ABCA1O95477 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ABCA1O95477 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ABCA1O95477 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ABCA1O95477 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.21□□□□□ -0.29
ABCA1O95477 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.21□□□□□ -0.29
ABCA1O95477 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.21□□□□□ -0.29
ABCA1O95477 AC079316.1-201ENST00000548397 411 ntBASIC13.21□□□□□ -0.29
ABCA1O95477 RN7SL560P-201ENST00000577943 264 ntBASIC13.21□□□□□ -0.29
ABCA1O95477 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
ABCA1O95477 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ABCA1O95477 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ABCA1O95477 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ABCA1O95477 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.21□□□□□ -0.3
ABCA1O95477 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.21□□□□□ -0.3
ABCA1O95477 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ABCA1O95477 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ABCA1O95477 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms