Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 MRPL20P1-201ENST00000400819 433 ntBASIC12.88□□□□□ -0.35
SSSCA1O60232 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.88□□□□□ -0.35
SSSCA1O60232 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 AC087388.1-201ENST00000571370 1112 ntBASIC12.88□□□□□ -0.35
SSSCA1O60232 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
SSSCA1O60232 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
SSSCA1O60232 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.87□□□□□ -0.35
SSSCA1O60232 KRT18P27-201ENST00000427733 1299 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
SSSCA1O60232 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.87□□□□□ -0.35
SSSCA1O60232 IGHV3-65-201ENST00000523210 341 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.87□□□□□ -0.35
SSSCA1O60232 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 AC021087.4-201ENST00000563761 564 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.87□□□□□ -0.35
SSSCA1O60232 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 MIR1199-201ENST00000621445 119 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SSSCA1O60232 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 LINC01230-201ENST00000625222 3017 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.87□□□□□ -0.35
SSSCA1O60232 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSSCA1O60232 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SSSCA1O60232 AC140479.7-201ENST00000636301 2332 ntBASIC12.87□□□□□ -0.35
SSSCA1O60232 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SSSCA1O60232 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SSSCA1O60232 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms