Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 AC114501.2-201ENST00000439631 535 ntBASIC16.76■□□□□ 0.27
O00370 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.76■□□□□ 0.27
O00370 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.76■□□□□ 0.27
O00370 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.76■□□□□ 0.27
O00370 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.76■□□□□ 0.27
O00370 AL512638.1-201ENST00000457493 794 ntBASIC16.76■□□□□ 0.27
O00370 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.76■□□□□ 0.27
O00370 RNA5SP421-201ENST00000516864 134 ntBASIC16.76■□□□□ 0.27
O00370 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.76■□□□□ 0.27
O00370 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 LINC01115-203ENST00000606068 577 ntBASIC16.76■□□□□ 0.27
O00370 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.76■□□□□ 0.27
O00370 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.76■□□□□ 0.27
O00370 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
O00370 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
O00370 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.75■□□□□ 0.27
O00370 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.75■□□□□ 0.27
O00370 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.75■□□□□ 0.27
O00370 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.75■□□□□ 0.27
O00370 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
O00370 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.75■□□□□ 0.27
O00370 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.75■□□□□ 0.27
O00370 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.75■□□□□ 0.27
O00370 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.75■□□□□ 0.27
O00370 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
O00370 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
O00370 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.75■□□□□ 0.27
O00370 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.75■□□□□ 0.27
O00370 AC004840.1-201ENST00000636359 365 ntBASIC16.75■□□□□ 0.27
O00370 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
O00370 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
O00370 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
O00370 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.75■□□□□ 0.27
O00370 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.75■□□□□ 0.27
O00370 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
O00370 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
O00370 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
O00370 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
O00370 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
O00370 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
O00370 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.74■□□□□ 0.27
O00370 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.74■□□□□ 0.27
O00370 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.74■□□□□ 0.27
O00370 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
O00370 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
O00370 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.74■□□□□ 0.27
O00370 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.74■□□□□ 0.27
O00370 KRT18P64-201ENST00000434946 1219 ntBASIC16.74■□□□□ 0.27
O00370 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.74■□□□□ 0.27
O00370 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms