Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 AP001282.1-201ENST00000531301 1499 ntBASIC11.56□□□□□ -0.56
SMKR1H3BMG3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SMKR1H3BMG3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AC245100.5-201ENST00000452108 331 ntBASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AC093827.2-201ENST00000512654 315 ntBASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 MTDHP4-201ENST00000600287 670 ntBASIC11.55□□□□□ -0.56
SMKR1H3BMG3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AC021097.1-201ENST00000607902 574 ntBASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.55□□□□□ -0.56
SMKR1H3BMG3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 NMU-205ENST00000511469 756 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AC106795.1-205ENST00000512851 1056 ntBASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 MTDHP3-201ENST00000594186 672 ntBASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AL031055.1-201ENST00000606362 631 ntBASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AL121956.5-201ENST00000625261 221 ntBASIC11.54□□□□□ -0.56
SMKR1H3BMG3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SMKR1H3BMG3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms