Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
TRAV5A0A0B4J249 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AL138918.1-201ENST00000568306 659 ntBASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AC025580.3-201ENST00000617932 1424 ntBASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 AJ011931.1-201ENST00000618749 2492 ntBASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAV5A0A0B4J249 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 MIR7706-201ENST00000613747 67 ntBASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AC116407.3-201ENST00000623905 1129 ntBASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAV5A0A0B4J249 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms