Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AC092171.3-201ENST00000610122 2651 ntBASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 AL118508.1-201ENST00000613502 2345 ntBASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC187A0A096LP49 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 BX539320.1-201ENST00000623759 877 ntBASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 AL138799.1-201ENST00000448213 1675 ntBASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC187A0A096LP49 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ALOX12P2-203ENST00000570921 1945 ntBASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 CALR4P-201ENST00000431943 946 ntBASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 GAPDHP40-201ENST00000505218 1006 ntBASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 RNA5SP486-201ENST00000515961 83 ntBASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC187A0A096LP49 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms